iSP-RAAC

Identifying the secretory protein using reduced amino acid alphabet composition

Example

>PF07_0103(Q8IBK8_PLAF7)(non sp) 
MWPVVMLLFGGGVLFVKKGLNYVKNQGIQLNGKRSFFPSGFNKNLNNLFLKNDLKGFERNMSKSEAFKILNINPTTNKEKIREVHKQLMLKNHPDNGGSTYIAAKVNEAKDILLK
>PF08_0014(Q8IBA7_PLAF7)(non sp)
MLIYFTNISIYVSKIHHHGLNKKIYNLNFVSNVFKYNARRRGNSLNVLINSPAQVKLSEMEDAKDRSGKYCIIEICGKIRWVEEGRFYDVFRIKQEENRNIYLNRILFYSNEEGNIFFGRPFLDNVRIHATVLNHFRGHKIYRLKYKPKKNYKRFYGHRQEMTRIKINKIEYNNELLGQEKRIYNFFKDDSLYYILNRIHNIVRPSLELKHLKKNFIEYINSFCSLKFETFYKHKGNYKKEKMLRNILKTKKLSKRPEVIEEVKKIEEEKKKQRLTKCDPLDDFDPVVNEFMIKEHFYS
>>PF08_0055 (O77370_PLAF7)(non sp)
MLRRNIRLRKEYLYLKKVEDEKKKYAEKIKSIKESYDKNKKIRGDLKDEESELRKNMNLYDEKSFDRKVDDEYFFCGLENPRVLITTSRNPSSTLENFAKELKLIIPNSEKINRGSYFIKDILNFARKNNITDVIILHEYKGIPRNLIICHLPFGPTLFCTIKDCKMRCEFNEKIDNISLCTPHLIFHNFHSDLGKRIMNIFKYLFPPVTMRTNKRKMPKHNSQIVKDNKLNKNININTNNNDTNQMDQMDQMNKIKFVTHTTQDDEDNNDHLQIYFKNNEYLNLQKYENNRVIVFFNKNDIIYFRHYNWEKNQTNEIVLKEIGPRFSFVVYKINKETLDSLNEDYEYIYRPFMNSRKALLT
>PFC1080c, 231 bases, FAD00D22 checksum.(sp)
MFHYIYKIYIFTIILCASNLFNNNVVEIGTYKLSYHNGGIQFRILAQKNTNKKSNGNTLTNILLKDKGGKGSKKKNPDDQISSLVSLVDNMNITQEKKDKIKNLSLKYINSRDVKEKNESINELQKYSNNEECKEYMDSYLMHLRMQNDIKCLKRKNLWNNIWINSITLTLIIIMIACVFSVEITSSSALYPAFILLIFIIYIYARYFPEMKIGYKGIKEACKYYFNKKSK 
>PFF0020c, 1325 bases, 2DAE4B42 checksum. 
MGSDYSSPGGNKSVNITESEKSARNVLEKIGRHIKDEINKNSNHTNKLKGTLSNAQFHDGLHKAAGWGVRYGPANSCDLEHRFYTNINNGYLPARNPCHNRNQNRFDENAEAYCNSDKIRGNENNSNAGACAPFRRQNLCDKNLEYLINENTKTTHDLLGNVLVTAKYEGDYIVNNHPNRGSSEVCIALARSFADIGDIVRGKDMFKSNDNVENGLREVFKKIYEGFLDKGAREHYKEVKNGNYIKLREDWWTANRDQVWKAMTCVAPENAYFRKTEADGIGISSLILPYSKCGRDTDPPVVDYIPQRLRWMSEWSEYFCNVLNKEIDEMNNQCKDCEMSRRCNNDTEGEKCKKCKEQCQIFKELVSKWKNEFDKQSMKYKELYIKASTNITKQNSSSPERGYRRNHRRRGYDDDTNVQLFLKKVIENNECKVESLGKYLDKTSHCGNYNFNYDNIPGSNRPNAFEIPPEKFKKACKCKIPNPLEKCPNEENKNVCTRFDKVSSCTSLFFKNDLIEWNNSGVKNKENDNNGVLVPPRRRNLCINLFSKKDYKMKDENDFKEDLLNAAFSQGKLLGKKYSNYSNEAYEAMKFSYADYSDIVKGTDMMNDLKKLNKELNTLLKETEKGDISVDRKTWWDDNKNVVWNAMLCGYKTENENQQLNSSWCNVPDDDNIDQFLRWLTEWAQQYCKEKLIKAHIINTKCKDIVEGRKHKSMVDITDVECKRLFIDYEEWFRYRYNQWKGLSEKYIKIKKSKNSGVNIPSEECAASYVTKHCNGCICNLRDMEDIHKNINNQNELMKEMINIIKFDTDQYRTQLQNISNSMEINPKSVKTAVDTTKDIVSYGLAGTMGVAAIGLQAGDFLGKKIQDLYNEFMKPVEKKLDTSSKNLNIYEDPNIMVPAGIGVALTLGLLLFKMRRKAKRQVDMIRILQMSQNEYGIPTTKSPNKYVPYGSQRYKGKTYLYVEGDTDEEKYMFMSDTTDITSSESEYEEMDINDIYVPGSPKYKTLIEVVLEPSKRDTQNDIPSDNTPSYKLTDEEWNQLKDDFISQYLPNTEPNNNYRSGNSPTNTNNTTTSHDNMGEKPFIMSIHDRNLYTGEEISYNINMSTNTNNDIPKYVSNNVYSGIDLINDTLSGNKHIDIYDEVLKRKENELFGTNHVKQTSIHSVAKNTYSDDAITNKINLFHKWLYRHRDMCEKWENHHERLAKLKEKWENDNDGGNVPSDNHVLNTDVSIEIDMDNPKPINQFSNMDINVDTPTMDNMEDDIYYDVNDNDDDNDQPSVYDIPMDHNKVDVDVPKKVHIEMKILNNTSNGSLEQQFPISDVWNI 
>PFB0985c, 229 bases, DB6FFAD2 checksum.
MFHYIYKIYIFTIILCASNLFNNNVVEIGTYKLSYHNGGIQFRMLAQKNTNKKPFGNTLTNILFKDKKKKNLDPQISSLVSLVDNMDITQEKKDKIKNLSLKYINSRDVKEKNESINELQKYSNNEECKEYMDSYLMHLRMQNDIKCLKRKNLWNNIWIVSTTLLLIIIMIACIIVCTPETYTALYPAFILLIFIIHIVARYFPDMKIGFKKLKTKLNTFFQNKKQITK 


Tips

(1) For each submission, the number of sequences is limited at 500 or less;
(2) Each sequence must start with a greater-than symbol (">") in the first column. The words right after the ">" symbol in the single initial line are optional and only used for the purpose of identification and description.
(3) The query sequence should be no shorter than 10 characters. The accepted characters are 1-letter of standard amino acids. If a query sequence contains any illegal character, the prediction will be stopped